TAP SET in Porphyra umbilicalis

Full lineage¹: cellular organisms; Eukaryota; Rhodophyta; Bangiophyceae; Bangiales; Bangiaceae; Porphyra

Protein source: JGI


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

SET
PHD
zf-C2H2
TCR
Myb_DNA-binding
CXC

(Domain names are clickable)



List of proteins (9)

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namename additionClick button to show/hide sequence: Download sequence?
Pum0115s0018.1.ppacid=38013495 transcript=Pum0115s0018.1 locus=Pum0115s0018 ID=Pum0115s0018.1.V1.5 annot-version=v1.5
Pum0138s0047.1.ppacid=38013572 transcript=Pum0138s0047.1 locus=Pum0138s0047 ID=Pum0138s0047.1.V1.5 annot-version=v1.5
Pum0200s0004.1.ppacid=38007357 transcript=Pum0200s0004.1 locus=Pum0200s0004 ID=Pum0200s0004.1.V1.5 annot-version=v1.5
Pum0204s0002.1.ppacid=38013789 transcript=Pum0204s0002.1 locus=Pum0204s0002 ID=Pum0204s0002.1.V1.5 annot-version=v1.5
Pum0248s0008.1.ppacid=38012070 transcript=Pum0248s0008.1 locus=Pum0248s0008 ID=Pum0248s0008.1.V1.5 annot-version=v1.5
Pum0381s0005.1.ppacid=38014069 transcript=Pum0381s0005.1 locus=Pum0381s0005 ID=Pum0381s0005.1.V1.5 annot-version=v1.5
Pum0381s0011.1.ppacid=38014077 transcript=Pum0381s0011.1 locus=Pum0381s0011 ID=Pum0381s0011.1.V1.5 annot-version=v1.5
Pum0399s0008.1.ppacid=38017740 transcript=Pum0399s0008.1 locus=Pum0399s0008 ID=Pum0399s0008.1.V1.5 annot-version=v1.5
Pum0506s0003.1.ppacid=38007800 transcript=Pum0506s0003.1 locus=Pum0506s0003 ID=Pum0506s0003.1.V1.5 annot-version=v1.5
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
Impressum